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An Effective Link-Based Clustering Algorithm for Detecting Overlapping Protein Complexes in Protein-Protein Interaction Networks 期刊论文
IEEE TRANSACTIONS ON NETWORK SCIENCE AND ENGINEERING, 2021, 卷号: 8, 期号: 4, 页码: 3275-3289
作者:  Hu, Lun;  Zhang, Jun;  Pan, Xiangyu;  Luo, Xin;  Yuan, Huaqiang
收藏  |  浏览/下载:42/0  |  提交时间:2022/08/22
Proteins  Clustering algorithms  Biology  Search problems  Partitioning algorithms  Optimization  Protein complex detection  protein-protein interaction network  link-based clustering  network clustering  
Incorporating the Coevolving Information of Substrates in Predicting HIV-1 Protease Cleavage Sites 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 6, 页码: 2017-2028
作者:  Hu, Lun;  Hu, Pengwei;  Luo, Xin;  Yuan, Xiaohui;  You, Zhu-Hong
收藏  |  浏览/下载:50/0  |  提交时间:2021/03/01
HIV-1 protease  substrate specificity  coevolving information  cleavage site prediction  
Efficiently Detecting Protein Complexes from Protein Interaction Networks via Alternating Direction Method of Multipliers 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 卷号: 16, 期号: 6, 页码: 1922-1935
作者:  Hu, Lun;  Yuan, Xiaohui;  Liu, Xing;  Xiong, Shengwu;  Luo, Xin
收藏  |  浏览/下载:104/0  |  提交时间:2020/08/24
Protein complex  protein interaction network  alternating direction method of multipliers  efficiency